Integrated Bioresource Information Division

Our staff members will present a poster at the 47th Annual Meeting of the Molecular Biology Society of Japan, scheduled for Nov. 27 to 29.

●　Magdaline Akinyi Otieno1, Kenta Suzuki, Toyoyuki Takada, Hiroshi Masuya
Title： Evaluation of Machine Learning procedures for feature selection and classification of Ebola disease phenotypes using Collaborative Cross-mice omics data.
🕒Nov 28, 2024 12:55 PM – 2:55 PM JST 🏛️Poster & Exhibition Venue 1 (Marine Messe Fukuoka Hall A, 1F)

●　Tatsuya Kushida, Daiki Usuda, Toyoyuki Takada, Hiroshi Masuya
Title： Development of a New Advanced Search System for Bioresources
🕒Nov 28, 2024 12:55 PM – 2:55 PM JST　🏛️Poster & Exhibition Venue 2 (Marine Messe Fukuoka Hall B, 1F)

●　Toyoyuki Takada, Daiki Usuda, Tatsuya Kushida, Hiroshi Masuya
Title： Update of the Mouse Genome variation Database MoG+
🕒Nov 29, 2024 12:55 PM – 2:55 PM JST　🏛️Poster & Exhibition Venue 2 (Marine Messe Fukuoka Hall B, 1F)

The research paper co-authored by Dr. Yamagata was published in Nucleic Acids Research.

Title: SSBD: an ecosystem for enhanced sharing and reuse of bioimaging data

The research paper co-authored by Dr. Suzuki was published in Communications Biology.

Title: Multifaceted effects of variable biotic interactions on population stability in complex interaction webs

“Interview with staff working in 12 laboratories” Interview series No.6
Working to Disseminate Bioresource Information with End-Users in Mind（Daiki Usuda, Technical Staff II）

Dr. Yuki Yamagata’s paper on using large language models for annotating biomedical figures in articles about cellular senescence has been published online in Genomics & Informatics.

Survey on large language model annotation of cellular senescence from figures in review articles
https://doi.org/10.1186/s44342-024-00011-6

The collaborative international research paper co-authored by Drs. Takada, Yoshiki (Director of the Experimental Animal Division) and Shiroishi (BRC Director) was published in ZooKeys.

Title: Type specimens, taxonomic history, and genetic analysis of the Japanese dancing mouse or waltzer, Mus wagneri variety rotans Droogleever Fortuyn, 1912 (Mammalia, Muridae)
https://doi.org/10.3897/zookeys.1200.118823

Dr. Yuki Yamagata’s research paper on developing a new ontology for COVID-19 infection processes has been published online in BMC Medical Informatics and Decision Making.

Homeostasis imbalance process ontology: a study on COVID-19 infectious processes
https://doi.org/10.1186/s12911-024-02516-0

Dr. Yuki Yamagata’s research paper on the ontological model that organizes knowledge of cellular senescence has been published online in Scientific Data.

Prototyping an Ontological Framework for Cellular Senescence Mechanisms: A Homeostasis Imbalance Perspective
https://doi.org/10.1038/s41597-024-03331-y

For a concise overview of this research paper, please watch our YouTube video.