{"id":246,"date":"2020-03-27T14:31:30","date_gmt":"2020-03-27T05:31:30","guid":{"rendered":"http:\/\/info.brc.riken.jp\/en\/?page_id=246"},"modified":"2024-06-21T16:05:17","modified_gmt":"2024-06-21T07:05:17","slug":"data_integration","status":"publish","type":"page","link":"http:\/\/info.brc.riken.jp\/en\/about\/introduction\/data_integration","title":{"rendered":"Data integration and standardization"},"content":{"rendered":"
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Aiming adding value and promotion of use for bioresources, we work on the data dissemination, integration and standardization of bioresource-related information. We will develop information technologies on data integration and retrieval, and implement advanced data searching system helps expanded use of bioresources in the important research fields such as health, foods, environments and energy production.<\/p>\n

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Integration of life science data related to bioresources<\/h2>\n

Along with “FAIR<\/a>” data principle, we we implemented integration of catalog data across mouse, plant, cell, genes and microbe resources and cross-search system across these resources using Resource Description Framework (RDF) related technologies which are standardized technology recommended by the Web recommended by World Wide Web Consortium (W3C).<\/p>\n

Related article: Taking the helm in bioresearch with the world\u2019s largest store of bioresources and associated information (OLSP website)<\/a><\/p>\n

Cross search system<\/a> on the top page of BRC Website<\/p>\n

Mouse Strain Search<\/a> on Experimental Animal Division’s page<\/p>\n

BioResource MetaDatabase<\/a><\/p>\n

Homeostasis Imbalance Process (HoIP) Ontology<\/a><\/p>\n

Leaves<\/a><\/p>\n<\/div>\n

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Data integration of genomic variation<\/h2>\n

Laboratory mouse is one of the premium bioresources for studying principles underlying higher-order biological phenomena and etiologies of human diseases. We develop a mouse genome polymorphism database, MoG+ (pronounce, m\u03acg pl\u02c8\u028cs); mouse genome database with high added value, to promote advanced use of experimental mice. MoG+ provides visualized mouse genomic variation among inbred mouse strains established in Japan as well as major classical inbred strains.<\/p>\n

Genome information in MoG+ have developed by collaboration with Comparative Genomics Laboratory, Advanced Genomics Center at National Institute of Genetics, and Joint Support-Center for Data Science Research, at Inter-University Research Institute Corporation Research Organization of Information and Systems. Genome information upgrading was also supported by NIG Advanced Genomics Project, and \u201cGenome Information Upgrading Program\u201d of AMED-NBRP. MoG+ is renewed edition of NIG_Mog2 that operated in Genetic Informatics Laboratory at National Institute of Genetics until FY2019.<\/p>\n

Mog+<\/sup><\/a><\/p>\n<\/div>\n

<\/p>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

Aiming adding value and promotion of use for bioresources, we work on the data dissemination, integration and standardization of bioresource-related information. We will develop information technologies on data integration and retrieval, and implement advanced data searching system helps expanded use of bioresources in the important research fields such as health, foods, environments and energy production. Integration of life science data related to bioresources Along with “FAIR” data principle, we we implemented integration of catalog data across mouse, plant, cell, genes and microbe resources and cross-search system across these resources using Resource Description Framework (RDF) related technologies which are standardized technology recommended by the Web recommended by World Wide Web Consortium (W3C). Related article: Taking the helm in bioresearch with the world\u2019s largest store of bioresources and associated information (OLSP website) Cross search system on the top page of BRC Website Mouse Strain Search on Experimental Animal Division’s page BioResource MetaDatabase Homeostasis Imbalance Process (HoIP) Ontology Leaves Data integration of genomic variation Laboratory mouse is one of the premium bioresources for studying principles underlying higher-order biological phenomena and etiologies of human diseases. We develop a mouse genome polymorphism database, MoG+ (pronounce, m\u03acg pl\u02c8\u028cs); mouse genome database with high added value, to […]<\/p>\n","protected":false},"author":7,"featured_media":0,"parent":50,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_seopress_titles_title":"","_seopress_titles_desc":"","_seopress_robots_index":"","_seopress_robots_follow":"","_seopress_robots_imageindex":"","_seopress_robots_snippet":"","_seopress_robots_primary_cat":"","_seopress_robots_breadcrumbs":"","_seopress_robots_freeze_modified_date":"","_seopress_robots_custom_modified_date":"","_seopress_robots_canonical":"","_seopress_social_fb_title":"","_seopress_social_fb_desc":"","_seopress_social_fb_img":"","_seopress_social_fb_img_attachment_id":0,"_seopress_social_fb_img_width":0,"_seopress_social_fb_img_height":0,"_seopress_social_twitter_title":"","_seopress_social_twitter_desc":"","_seopress_social_twitter_img":"","_seopress_social_twitter_img_attachment_id":0,"_seopress_social_twitter_img_width":0,"_seopress_social_twitter_img_height":0,"_seopress_redirections_value":"","_seopress_redirections_enabled":"","_seopress_redirections_enabled_regex":"","_seopress_redirections_logged_status":"both","_seopress_redirections_param":"","_seopress_redirections_type":301,"_seopress_analysis_target_kw":"","footnotes":"","_wp_rev_ctl_limit":""},"class_list":["post-246","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/pages\/246","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/users\/7"}],"replies":[{"embeddable":true,"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/comments?post=246"}],"version-history":[{"count":6,"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/pages\/246\/revisions"}],"predecessor-version":[{"id":742,"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/pages\/246\/revisions\/742"}],"up":[{"embeddable":true,"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/pages\/50"}],"wp:attachment":[{"href":"http:\/\/info.brc.riken.jp\/en\/wp-json\/wp\/v2\/media?parent=246"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}