Education
- Master’s/Doctoral Program in Life Science Innovation, University of Tsukuba
- Research field:Bioinformatics and Data integration (Hiroshi Masuya:Professor,School of Integrative and Global Majors,University of Tsukuba)
https://tlsi.tsukuba.ac.jp/education_e.html
External funds
- Scientific Research C, Grant-in-Aid for Scientific Research (KAKENHI)
- Development of a workflow enabling high-accurary detection of mouse phenotypic abnormalities at the individual level (Nobuhiko Tanaka)
https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-21K05993/ - MOONSHOT Research & Dvelopment Program
- Creation of the industry that enables sustainable global food supply by exploiting unused biological resources
Building a platform for sustainable farming by environmental control based on the microbe atlas of the soil
https://www.naro.go.jp/laboratory/brain/moon_shot/202011_nikkei_chibaPD_en.pdf - Exploratory, Grant-in-Aid for Challenging Research (KAKENHI)
- Development of high-speed emission for aging factors detecting molecular events in vivo.
https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-20K21851/ - Scientific Research C, Grant-in-Aid for Scientific Research (KAKENHI)
- Development of energy landscape based methods to detect early warnings of large compositional shifts in ecological communities (Kenta Suzuki)
https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-20K06820/ - Scientific Research B, Grant-in-Aid for Scientific Research (KAKENHI)
- Evaluation and prediction of the resilience of biological communities under global environmental change
https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-20H03010/ - RIKEN Open Life Science Platform
- Our aim is to achieve an analysis platform for the open bigdata that enables to predict states of cells and organisms in the data-driven way with the collection and integration of multi-layer and multi-modal data in life science.
https://olsp.riken.jp/en/
Collaborations
- Inernatioal Mouse Phenotyping Consortium (IMPC)
- http://www.mousephenotype.org
- RIKEN MetaDatabase
- http://metadb.riken.jp
- National Bioscience Database Center (NBDC)
- https://biosciencedbc.jp/en/
- Asian Mouse Mutagenesis Resource Association (AMMRA)
- http://ammra.info/
- SPARQLthon (Japanese Only)
- http://wiki.lifesciencedb.jp/mw/SPARQLthon
- SPARQL Builder Project / LOD Surfer Project
- http://www.sparqlbuilder.org,
https://github.com/dbcls/bh17/wiki/LOD-Surfer - Hozo – Ontology Editor
- http://www.hozo.jp
External funds(completed)
- ROIS-DS-JOINT2020(2020)
- Advancement and utilization of an information infrastructure to promote genomic medicine for rare and intractable diseases (Tatsuya Kushida)
- NBRP Genome Information Upgrading Program(2020)
- Long-read sequencing of disease model mouse strains established in Japan (Toyoyuki Takada)
- Scientific Research B, Grant-in-Aid for Scientific Research (KAKENHI)“Molecular phylogeny and evoltuionary hisory of the commensal rodents from Myanmar”(2019-2020)
- https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-17H04604/
- Program for an Integrated Database of Clinical and Genomic Information, Japan Agency for Medical Research and Development“PathogenicVariantDatabaseDirectlyApplicabletoClinicalService” (Co-researcher)(2016-2020)
- https://www.amed.go.jp/en/program/list/04/01/006.html
- Brain and Individuality, Scientific Research on innovative Areas (FY2016-2020)
- Project of Planned Research: “Development of a Phenotype Recording and Mining System for Discovering Individuality” (Co-Project leader)
http://www.koseisouhatsu.jp/en/ - Scientific Research B, Grant-in-Aid for Scientific Research (KAKENHI)“Development of reasoning technology for aging studies”(2018-2020)
- https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-18H03298/
- Grant-in-Aid for Challenging Exploratory Research, Grant-in-Aid for Scientific Research (KAKENHI)(2016-2018)
- https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-16K14600/
- Innovative Food & Healthcare MASTER(2018)
- https://www.fmi.hokudai.ac.jp/coi_en/
