Integrated Bioresource Information Division

Now published in the online edition of the scientific journal “Nucleic Acids Research” on November 29, 2025.

JoGo 1.0: the ACTG hierarchical nomenclature and database covering 4.7 million haplotypes across 19,194 human genes

Oral presentation at AMMRA2025

Date: September 19, 2025
Conference Period: September 18–19, 2025
Venue: Kawasaki, Japan
Title: AI Model Development for Daily Mouse Behaviors in the RIKEN AGIS Project
Authors: Hiroshi Masuya, Yuki Yamagata, Masanobu Yamagata, et al.

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Oral presentation at the 13th Symposium on Laboratory Animal Science

Date: September 26, 2025
Venue: Kyoto, Japan
Title: Development Plan for a Machine Learning Model of Daily Mouse Behavior – As Part of the RIKEN AGIS Project
Author: Hiroshi Masuya

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Oral presentation at ANRRC2025

Date: October 10, 2025
Conference Period: October 9–10, 2025
Venue: Bangkok, Thailand
Title: Data Integration Platforms Supporting Life Science Research
Authors: Hiroshi Masuya, Toyoyuki Takada, Daiki Usuda, et al.

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Oral presentation at The 10th AFLAS Congress & The 18th Academic Conference on Laboratory Animal Science and Technology of China

Date: October 22, 2025
Conference Period: October 21–23, 2025
Venue: Hangzhou, China
Title: A Project to Develop an AI Model for Comprehensive Learning of Daily Behaviors in Mice and Marmosets
Authors: Hiroshi Masuya, Toyoyuki Takada, Daiki Usuda, et al.

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Ms. Magdaline Akinyi Otieno has successfully obtained her Master’s degree from the Graduate School of Science and Technology, University of Tsukuba.

Her master’s thesis, titled “Harnessing Machine Learning for Identification of Viral Infection Signatures with Cross-Disease Predictive Transferability,” analyzed gene expression patterns associated with viral infections using machine learning.

Ms. Otieno is now pursuing her doctoral studies, aiming to further advance her research.
We sincerely support her new challenges and look forward to her continued success.

Now published in the online Database Issue of the scientific journal “The ISME Journal” (29 Sep.).

Enrichment of horizontally transferred gene clusters in bacterial extracellular vesicles via non lytic mechanisms

The article introduces MoG+, a database that provides mouse strain and genomic variant data, and highlights how such high-quality data is paving the way for future advances in life sciences.

The full article is available at the link below.
👉 Mouse data librarian

The 98th Annual Meeting of the Japanese Society for Bacteriology
Date: May 29–31, 2025

Presentation Schedule:
May 29, 2025, 15:25–16:35 – Flash Talk and Poster Presentation

Title:
Growth history under starvation influences subsequent reproduction in a clonal bacterial microcolony

Authors:
Sotaro Takano et al.

Now published in the online edition of BMC (BioMed Central) on May 16, 2025.

This study evaluates the performance of federated search technology (SPARQL queries) and proposes a method to efficiently identify appropriate model organisms for specific disease research by integrating multiple life science databases.

Federated SPARQL query performance evaluation for exploring disease model mouse: combining gene expression, orthology, and disease knowledge graphs

Now published in the online edition of the scientific journal “Proceedings of the National Academy of Sciences of the United States of America（PNAS）” on April 21, 2025.

Linking energetic instability to compositional changes in biological communities