Integrated Bioresource Information Division

The research paper co-authored by Dr. Suzuki was published in Communications Biology.

Title: Multifaceted effects of variable biotic interactions on population stability in complex interaction webs

“Interview with staff working in 12 laboratories” Interview series No.6
Working to Disseminate Bioresource Information with End-Users in Mind（Daiki Usuda, Technical Staff II）

The Genetics Society of Japan 96th Annual Meeting
Date: 14:15-16:00, September 5, 2024
Venue：E（A213）Workshops
［WS10］:The current situation of a drastic decrease in the number of students taking biology as an elective, and suggestions for reversing this trend
Presenter: Hiroshi Masuya, PhD（Director）
Title: Recent topics in biology terminology: selection of high school textbook terms, etc.

Date: 9:45-10:00, September 6, 2024
Venue：E（A213）Oral sessions
OS10：Medical genetics, Animal disease model
Presenter: Toyoyuki Takada, PhD (Research scientist)
Title: Distribution of Structural Variants Revealed by Long-Read Genome Sequencing in Mice

Dr. Yuki Yamagata’s paper on using large language models for annotating biomedical figures in articles about cellular senescence has been published online in Genomics & Informatics.

Survey on large language model annotation of cellular senescence from figures in review articles
https://doi.org/10.1186/s44342-024-00011-6

Dr. Yuki Yamagata’s research paper on developing a new ontology for COVID-19 infection processes has been published online in BMC Medical Informatics and Decision Making.

Homeostasis imbalance process ontology: a study on COVID-19 infectious processes
https://doi.org/10.1186/s12911-024-02516-0

Dr. Yuki Yamagata’s research paper on the ontological model that organizes knowledge of cellular senescence has been published online in Scientific Data.

Prototyping an Ontological Framework for Cellular Senescence Mechanisms: A Homeostasis Imbalance Perspective
https://doi.org/10.1038/s41597-024-03331-y

For a concise overview of this research paper, please watch our YouTube video.

Research paper co-authored by Drs. Takada and Shiroishi was published in Genome Research.

Title: Inference of selective forces on house mouse genomes during secondary contact in East Asia
https://doi.org/10.1101/gr.278828.123>

Our staff members will have oral/poster presentations in the 71th Annual Meeting of Japanese Association for Laboratory Animal Science on May 29-31, 2024.

Program (in Japanese)

Title： Exploring human disease-related genomic variants in mouse strains (oral)
Authors： Toyoyuki Takada, Nobutaka Mitsuhashi, Yuki Moriya, Hirokazu Chiba, Takeya Kasukawa, Hiroshi Masuya

Date： May 24,2023 05:00 PM – 06:00 PM
Title： Introduction of New Feature in RIKEN BRC BioResource Search: “Advanced Search” (poster)
Authors： Daiki Usuda, Tatsuya Kushida, Hiroshi Masuya